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Pharmacogenetics: Tailoring Medication for Safety

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The video introduces the field of cardiogenetics and its critical role in understanding how genetic factors influence cardiovascular health. Hosted by Dr. Juan McGuire, the discussion features Dr. Silvana Miskovic, an expert in preventive genetics who explains that while humans carry approximately 2,000 genetic defects, recent advancements since 2005 have allowed scientists to identify specific genes linked to common conditions. These include coronary artery disease, familial hypercholesterolemia, hypertension, cardiomyopathy, and atrial fibrillation. Dr. Miskovic notes that while there are around 30,000 known gene variants, only a few hundred to low thousands have strong evidence connecting them directly to cardiovascular diseases, highlighting the precision required in modern genetic analysis. A significant portion of the conversation focuses on the practical aspects of genetic testing, including sample collection and reliability. Dr. Miskovic emphasizes that saliva samples are often preferred for their non-invasive nature, yet they provide DNA quality comparable to blood or oral swabs. Modern technologies like next-generation sequencing offer high analytical accuracy of around 99% and sensitivity between 95% and 99%, making them highly effective tools for screening. The discussion illustrates how these tests can reveal specific polymorphisms that affect lipid metabolism, homocysteine levels, and the risk of sudden cardiac death, providing a detailed genetic profile that goes beyond simple blood work. The video also underscores the importance of interpreting genetic data within a broader clinical context rather than relying solely on laboratory results. Dr. Miskovic explains that their "cardiovascular sensor" combines quantitative analysis with qualitative, psychologically friendly visual presentations to help patients understand their risks, such as the impact of omega-3 fatty acids or the need for specific vitamin supplements like B6 and B12. Crucially, she stresses that the final interpretation and medical recommendations must always come from a qualified physician who considers the patient's overall health, rather than automated lab reports which may lack necessary scientific nuance or personalized advice. Ultimately, the podcast concludes by defining the standards for appropriate genetic testing, which must include the analysis of relevant genes, high-performance technology, adequate counseling, and interpretation grounded in scientific literature. The segment transitions from general cardiogenetics to pharmacogenetics, setting the stage for how these genetic insights can be used to tailor medication regimens for safety and efficacy. By integrating genetic data with clinical judgment, healthcare providers can significantly reduce adverse drug reactions and create personalized preventive programs that lower the risk of cardiovascular diseases, marking a pivotal shift toward safer and more effective medical treatments.
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Welcome to the Texas Heart Institute educational programs and podcast series on the latest advances in cardiogenetics. My name is Juan McGuire. I'm a clinical professor of cardiology at Baylor College of Medicine and interventional cardiologist at Texas Heart Institute Baylor St. Luke's Medical Center in Houston, Texas. How genes influence our health? Most of our genetic mutations and defects are inherited from our parents. Some of the genes, however, are altered by the environment and could have a far harmful effect on our health. The best known cause of environmental mutations is radioactivity, but there are many others. It is estimated that each person carries about 2,000 genetic defects, which may in some cases cause various illnesses. Thanks to the latest genetic testing technologies, it is now possible to analyze specific genes to determine genetic traits that are linked to various diseases. Based on genetic analysis, it is possible to develop a preventive program that significantly reduces the risk of various cardiovascular diseases. Every person reacts differently to medications. According to estimates, approximately 7% of patients suffer from severe adverse reactions to drugs, and about 0.4% suffer fatal consequences. Adverse reactions to drugs are the fifth most common frequent cause of death in developed world. In most cases, these reactions are determined by inherited genetic variations, environmental factors, and also certain drug interactions. Our first podcast in this series is on cardiogenetics. Our guest today is Dr. Silvana Miskovic from Split, Croatia. Dr. Miskovic graduated from the Medical School of Zagreb in 1999 in Split, Croatia. She holds a degree in sports medicine and in human genetics from European School of Genetic Medicine Bologna, Italy. She has published extensively on this topic and is an author of a book Genetic Counseling and Practice. Since 2005, she's working in the field of immunology, oncology, and preventive genetics at the polyclinic Analiza in Split, Croatia. Dr. Miskovic, welcome to this podcast. Uh, when did we start to identify the factor of specific genes or cardiovascular conditions? >> The starting of identification of specific genes in cardiovascular diseases is started after 2005. Uh, when genome-wide association is started and transferred the complete field of genetic investigation. Uh, in this period, the uh, investigators remove from um, analyzing the rare inherited cardiovascular diseases and trying to identify genetic variation that are association with a different type of uh, genetic disease genetic cardiovascular diseases. >> Thank you very much. So, Silvana, how many relevant genes so far have been identified in the diseases. >> Uh dear professor, when you ask me that question, the the answer is lots of Um when we including the all relevant relevant functional evidence-based of expression studies, rare variants studies, or pathways analysis, uh the number of the gene or gene variant is around a 30,000. Uh but when you ask me about the relevant genes connected with the strong evidence with the cardiovascular disease, the number of genes is around uh hundreds to low thousands. >> Very good. So, this is interesting. We already have quite a bit of information. So, what are the most uh important conditions that we have already identified as far as cardiovascular conditions are concerned? >> Uh the most important conditions are coronary artery disease, familial hypercholesterolemia, uh arterial hypertension, uh dilatative or hypertrophic cardiomyopathy, atrial fibrillation, uh syndrome of prolonged QT interval, uh myocardial infarction, and I think the heart failure. >> Very interesting. So, another important uh topic is uh what is required to obtain adequate sample for well, genetic or cardiogenetic testing. I know there are several options available. Well, what is the most reliable uh uh well, sample that we can obtain to get meaningful information? >> Uh we have three type of samples. That is is blood, oral swab, and saliva sample. Uh the Uh the saliva sample we use in our clinic because it's a non-invasive testing without the discomfort of the patient, and the saliva contains cells which provide us a DNA molecules which is adequate for uh any type of genetic testing, especially cardiogenetic testing. >> Excellent, Silvana. So, how reliable and sensitive is genetic testing depending on the type of the sample that we can obtain? >> Uh the new method of of genetic technology such as next generation sequencing have high analytical accuracy around the 99% and the sensitivity around 95 to 94 95 to 99%. >> Excellent, Silvana. So, here we have one of the examples of the test on one of the patients that you analyzed. And can you explain the information that is provided in this table related to genetic variations and polymorphism that affects cardiovascular system? I hope you can see this image. >> Yes, I see this image. Uh that is a table or some picture of more than 20 relevant genes including with a high evidence to connection with the cardiovascular diseases. Uh you can see the name of the gene, the relevant polymorphism based of scientific publication, and also the genotype of that patient. Uh genotype is a picture of our alleles that we from our parents. Uh for example, the first two gene are connected with a high risk of heart disease. Um APOA5 is connected with the lipid metabolism, while the methylenetetrahydrofolate gene is connected with the homocysteine metabolism. >> Very good. So, can you explain also the information that's provided in this following table on again another studied patient with some genetic variations and polymorphism that affects cardiovascular system. And here is so-called cardiovascular sensor. Maybe you can mention what did it mean cardiovascular sensor? >> Uh okay, the cardiovascular sensor is one type of our genetic test that we perform in our clinic. Uh in this picture, you can see two genes connected with a high risk of heart disease. Uh that is a cadherin 13 and coronary heart disease susceptibility to eight gene. Uh you see the name, the relevant polymorphism connected with the scientific references. Also, you see the three possible genotype population prevalence and results of our patient. For example, when we speak about the cadherin 13, uh this patient is a carrier of a GG genotype uh with a population prevalency of 59% and also this GG genotype is connected with high risk of uh heart disease uh in compared with a TT genotype. Uh when we speak about the coronary heart disease susceptibility to eight, uh, you see the patient is a carrier of GC GC genotype. Uh, the population prevalence of that genotype is 45% and that genotype is connected with 1.47 higher risk >> [snorts] >> uh, higher risk of heart diseases in compared with a GG genotype. Uh, in the lower part of this picture, you you can see the references. Uh, I think the all genetic test including the cardiovascular sensor must have the scientific publication or scientific reference because they give us credibility when we speak about about genotype, about the polymorphism and results of our patient. >> Very good. This is very meaningful and very important information in screening our patients for cardiovascular diseases. And here is a another example of cardiogenetics and cardiovascular risk risk factors. It's a like a summary of all the tests that you have done in one of your patients and can you describe what are your findings as far as those risk factors are concerned? >> Uh, that is the graphically presentation of cardiovascular risk in in the patient. You can see the four target point in our cardiovascular sensor. The lipid metabolism, homocysteine metabolism, risk of sudden cardiac death and uh it's missing the risk of heart disease. Uh this type of um presentation is a base of psychological effect that we know that lots of people easily remember images and also the colors than the numbers. Uh in this slide, you can see uh that our patient uh have the um little uh risk for high LDL cholesterol. Uh little risk uh of uh low uh HDL cholesterol with a positive effect of omega-3 fatty acids on HDL cholesterol. Uh based of a genetic base of genetic uh investigation, uh that patient doesn't have any problem with the triglycerides. Also, also, you can see uh that patient have uh high increased risk for high level of homocysteine in the blood without without the positive effect of a vitamin B2. Uh for example, in this patient, we can prescribe the metal forms of vitamin B6, B12, and metal folic acid. Uh also, you can see the connection between aspirin and arterial thrombosis in the side of the protection of the patient, but unfortunately, this uh this patient uh have increased risk of sudden cardiac death uh due to prolonged QT interval. >> So, this is very interesting and meaningful information for the lay public because they can comprehend that easily. It's a qualitative assessment rather than quantitative, but you can also provide as in previous slides you have shown also quantitative risk from the publications that were previously done. >> Absolutely. >> Now, there is a also this information of a summary of affected genes that contribute to various conditions that you have already mentioned as far as uh uh the risk concerned related to coronary disease and uh a heart attack. Uh but there are also the variables that are included there that uh affect uh cardiovascular conditions as you have mentioned previously. Any other comments on it? >> Uh absolutely not because in um our cardiovascular sensors we combine uh two important part. Um quantified analysis is connected with us with the physicians and also the quality analysis based on psychological effect uh for our patients. >> One thing that's really important that uh I appreciate and I think it's uh very important that when you provide uh your genetic analysis you always mention that the final interpretation decision and recommendation is uh based on a professional opinion of the physician that's taking care of the patient, not the lab. And uh that that is very important because there are some other labs that either don't give recommendations or make recommendations that are not necessarily absolutely scientifically based. >> Absolutely. In our laboratory uh the major part is the communication between the physicians and also the our patients. >> Very good. So, there are a few other questions that are very important for any practicing physician and also our patients. There are many genetic testing facilities available worldwide. What should the most appropriate genetic testing include? >> Uh the most appropriate genetic testing must include analysis of relevant gene, the analysis of genetic variants connected with that type of disease, high analytical performance based on high accuracy, and also high sensitivity, adequate genetic counseling, and interpretation based on scientific references. >> Excellent. So, what does your lab's report include when you when when we request a pharmacogenetic and genetic testing in general? >> Uh when we ask about the pharmacogenetic, our laboratory include analysis of 14 14 genes. Patient, also the analysis of relevant polymorphisms and also analysis of a gene type of the patient. >> Thank you very much for this information. Uh we Dr. Mishkovich, we are greatly appreciative uh of your participation in this podcast series on the cardiogenetics. And the next program will be on pharmacogenetics, which is actually a continuation of um the analysis that you routinely perform on the samples that are sent to your lab.